Sequence Alignment Tools: One Parallel Pattern to Rule Them All?
نویسندگان
چکیده
منابع مشابه
Sequence Alignment Tools: One Parallel Pattern to Rule Them All?
In this paper, we advocate high-level programming methodology for next generation sequencers (NGS) alignment tools for both productivity and absolute performance. We analyse the problem of parallel alignment and review the parallelisation strategies of the most popular alignment tools, which can all be abstracted to a single parallel paradigm. We compare these tools to their porting onto the Fa...
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ژورنال
عنوان ژورنال: BioMed Research International
سال: 2014
ISSN: 2314-6133,2314-6141
DOI: 10.1155/2014/539410